This R Shiny app clusters samples based on their genotype data across a set of markers and creates MDS, tree, and tile plots.

Sample data files can be found at:

https://github.com/mfcovington/shiny-cluster-genotypes/releases/tag/sample-files.

One sample file is tab-delimited and the other is comma-separated. In the file named 'sample-data.snps.txt', both 'N' and 'U' represent NA values. Therefore, enter the following into the field for NA strings: N,U